Formats a GTF file for use with iCount sigxls
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
gtf
:file
A GTF file to use for the segmentation
*.{gtf}
fai
FAI file corresponding to the reference sequence
*.{fai}
Groovy Map containing sample information
*_seg.gtf
Segmented GTF file for use with iCount sigxls
regions
*_regions.gtf.gz
Regions file for use with iCount sigxls
*.{gtf.gz}
versions
versions.yml
File containing software versions
Computational pipeline for analysis of iCLIP data
