Report proportion of cross-link events/sites on each region type.
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
bed
:file
BED file of crosslinks
segmentation
A iCount segmentation file
*.{gtf}
summary_type
*summary_type.tsv
Summary type output stats file
summary_subtype
*summary_subtype.tsv
Summary subtype output stats file
summary_gene
*summary_gene.tsv
Summary gene output stats file
versions_icount_mini
${task.process}
:string
The name of the process
iCount-Mini
The name of the tool
iCount-Mini -v
:eval
The expression to obtain the version of the tool
versions
Computational pipeline for analysis of iCLIP data
