Demultiplex paired-end FASTQ files from QuantSeq-Pool
meta:map
Groovy Map containing sample information e.g. [ id:‘NVQ’, lane:1 ]
reads:file
List of input FastQ files
Undetermined_S*.fastq.gz
samplesheet:file
Input samplesheet
*.{csv}
fastq
meta:file
Demultiplexed sample FASTQ files
*.fastq.gz
[!undetermined]*.fastq.gz:file
undetermined
Optional undetermined sample FASTQ files
Undetermined_R?.fastq.gz
undetermined_R?.fastq.gz:file
stats
demultipexing_stats.tsv:file
Demultiplexing Stats
demultipexing_stats.tsv
versions
versions.yml:file
File containing software versions
versions.yml
A Lexogen tool for demultiplexing and index error correcting fastq files. Works with Lexogen i7, i5 and i1 barcodes.
