Genomic island prediction in bacterial and archaeal genomes
meta
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
genome
Genome file in .gbk or .embl format. pattern: "\*.{gbk, embl, gbff}"
gff
GFF file listing the predicted genomic islands and their coordinates
*.gff
log
Log file of the islandpath run
*.log
versions
File containing software versions
versions.yml
IslandPath-DIMOB is a standalone software to predict genomic islands (GIs - clusters of genes in prokaryotic genomes of probable horizontal origin) in bacterial and archaeal genomes based on the presence of dinucleotide biases and mobility genes.
