Description

write your description here

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

input:file

Kaiju input file

db:file

Kaiju database

taxon_rank:string

Taxonomic rank to display in report pattern: “phylum|class|order|family|genus|species”

Output

name:type
description
pattern

summary

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.txt:file

Kaiju output file

*.txt

versions

versions.yml:file

File containing software versions

versions.yml