Make Kaiju FMI-index file from a protein FASTA file
meta:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
fasta:file
Uncompressed Protein FASTA file (mandatory)
*.{fa,faa,fasta}
keep_intermediate:boolean
Keep intermediate files
true|false
fmi
*.fmi:file
Kaiju FM-index file
*.{fmi}
bwt
*.bwt:file
Kaiju intermedite bwt-index file (not needed for classification)
*.{bwt}
sa
*.sa:file
*.{sa}
versions
versions.yml:file
File containing software versions
versions.yml
Fast and sensitive taxonomic classification for metagenomics
