Description

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

Input

Name (Type)
Description
Pattern

fasta (file)

fasta file

*.{fa,fasta}

kmer_size (value)

k-mer size to use

[0-9]+

Output

Name (Type)
Description
Pattern

report (file)

Text file containing unique-kmers.py execution report

report.txt

kmers (file)

Text file containing number of kmers

kmers.txt

versions (file)

File containing software versions

versions.yml