Description

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

Input

name:type
description
pattern

fasta:file

fasta file

*.{fa,fasta}

kmer_size:integer

k-mer size to use

Output

name:type
description
pattern

report

report.txt:file

Text file containing unique-kmers.py execution report

report.txt

kmers

kmers.txt:file

Text file containing number of kmers

kmers.txt

versions

versions.yml:file

File containing software versions

versions.yml