In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
meta:map
Groovy Map containing sample information e.g. [ id:'sample1' ]
[ id:'sample1' ]
fasta:file
fasta file
*.{fa,fasta}
kmer_size:integer
k-mer size to use
report
*.report.txt:file
Text file containing unique-kmers.py execution report
*.report.txt
kmers
*.kmers.txt:file
Text file containing number of kmers
*.kmers.txt
versions
versions.yml:file
File containing software versions
versions.yml
khmer k-mer counting library
