Description

Merge search results from multiple databases.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

search_out:file

The output file created by kmcp search

*.gz

Output

name:type
description
pattern

result

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.gz:file

Output file in gzipped format

*.gz

versions

versions.yml:file

File containing software versions

versions.yml

Tools

kmcp

Accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping