Generate taxonomic profile from search results
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
search_results{:bash}
:file
Gzipped file output from kmcp search module
*.gz
db{:bash}
:directory
Database directory containing taxdump files and taxid file
profile{:bash}
*.profile{:bash}
Tab-delimited format file with 17 columns.
*.profile
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping
