Download and build (custom) KrakenUniq databases
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
custom_library_dir:directory
Optional directory containing custom fasta files for database build
*
custom_taxonomy_dir:directory
Optional directory containing custom taxonomy files for database build
custom_seqid2taxid:file
custom seqid2taxid
keep_intermediate:boolean
Keep intermediate files that are not used by the database itself
true|false
db
${prefix}/:directory
Directory containing KrakenUniq database
*/
versions
versions.yml:file
File containing software versions
versions.yml
Metagenomics classifier with unique k-mer counting for more specific results
