modules/krona_ktimporttext
Creates a Krona chart from text files listing quantities and lineages.
plottaxonomyinteractivehtmlvisualisationkrona chartmetagenomics
Input
name:type
description
pattern
Tab-delimited text file. Each line should be a number followed by a list of wedges to contribute to (starting from the highest level). If no wedges are listed (and just a quantity is given), it will contribute to the top level. If the same lineage is listed more than once, the values will be added. Quantities can be omitted if -q is specified. Lines beginning with ’#’ will be ignored.
*.{txt}