Description

KronaTools Update Taxonomy downloads a taxonomy database

Input

No input parameters

Output

name:type
description
pattern

db

taxonomy/taxonomy.tab

:file

A TAB separated file that contains a taxonomy database.

*.{tab}

versions_krona

${task.process}

:string

The name of the process

krona

:string

The name of the tool

ktImportTaxonomy | grep -Po '(?<=KronaTools )[0-9.]+'

:eval

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions

${task.process}

:string

The name of the process

krona

:string

The name of the tool

ktImportTaxonomy | grep -Po '(?<=KronaTools )[0-9.]+'

:eval

The expression to obtain the version of the tool

Tools

krona
https://raw.githubusercontent.com/marbl/Krona/master/KronaTools/LICENSE.txt

Krona Tools is a set of scripts to create Krona charts from several Bioinformatics tools as well as from text and XML files.