Description

Makes a dotplot (Oxford Grid) of pair-wise sequence alignments

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

maf (file)

Multiple Aligment Format (MAF) file, compressed with gzip

*.{maf.gz}

format (string)

Output format (PNG or GIF).

Output

Name (Type)
Description
Pattern

png (file)

Pairwise alignment dot plot image, in PNG format.

*.png

gif (file)

Pairwise alignment dot plot image, in GIF format.

*.gif

versions (file)

File containing software versions

versions.yml