Description

Reorder alignments in a MAF file

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

maf (file)

Multiple Aligment Format (MAF) file, optionally compressed with gzip

*.{maf.gz,maf}

Output

Name (Type)
Description
Pattern

maf (file)

Multiple Aligment Format (MAF) file, compressed with gzip

*.{maf.gz}

versions (file)

File containing software versions

versions.yml
author
Github user charles-plessy
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Tools

last
GPL-3.0-or-later

LAST finds & aligns related regions of sequences.

gitlab.com/mcfrith/last gitlab.com/mcfrith/last/-/blob/main/doc https://gitlab.com/mcfrith/last