Find suitable score parameters for sequence alignment
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
fastx{:bash}
:file
FASTA/FASTQ file
*.{fasta,fastq}
index{:bash}
:directory
Directory containing the files of the LAST index
lastdb/
param_file{:bash}
*.train{:bash}
Trained parameter file
*.train
multiqc{:bash}
*.tsv{:bash}
Alignment parameter summary for MultiQC
*.tsv
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
LAST finds & aligns related regions of sequences.
