Find suitable score parameters for sequence alignment
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
fastx{:bash}
:file
FASTA/FASTQ file
*.{fasta,fastq}
index{:bash}
:directory
Directory containing the files of the LAST index
lastdb/
param_file{:bash}
*.train{:bash}
Trained parameter file
*.train
multiqc{:bash}
*.tsv{:bash}
Alignment parameter summary for MultiQC
*.tsv
versions_last{:bash}
${task.process}{:bash}
:string
The name of the process
last{:bash}
The name of the tool
lastal --version | sed 's/lastal //'{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
LAST finds & aligns related regions of sequences.
