Description

Align sequences using learnMSA

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'test']

fasta{:bash}

:file

Input sequences in FASTA format.

*.{fa,fasta}

Output

name:type
description
pattern

alignment{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'test']

*.aln{:bash}

:file

Alignment file, in FASTA format.

*.aln

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

learnmsa
MIT

learnMSA: Learning and Aligning large Protein Families