Index chain files for lift over
meta
:map
Groovy Map containing sample information e.g. [ id:'reference' ]
[ id:'reference' ]
fai
:file
FAI (FASTA index) file of the target reference
*.{fai}
chain
Chain file to index.
*.{chain}
clft
*.clft
Clft file of indexed chain
*.{clft}
versions_leviosam2
${task.process}
:string
The name of the process
leviosam2
The name of the tool
leviosam2 --version
:eval
The expression to obtain the version of the tool
versions
Fast and accurate coordinate conversion between assemblies
