Description

Multiple Sequence Alignment using Graph Clustering

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing fasta meta information e.g. [ id:'test', single_end:false ]

fasta{:bash}

:file

Input sequences in FASTA format.

*.{fa,fna,fasta}

Output

name:type
description
pattern

tree{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

*.tree{:bash}

:file

File containing the output guidetree, in newick format.

*.tree

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

magus
MIT

Multiple Sequence Alignment using Graph Clustering