Creates vastly reduced representations of sequences using MinHash
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
reads
:file
List of input paired-end FastQ files
mash
*.msh
Sketch output
*.{mash}
stats
*.mash_stats
Sketch statistics
*.{mash_stats}
versions_mash
${task.process}
:string
The name of the process
The name of the tool
mash --version 2>&1
:eval
The expression to obtain the version of the tool
versions
Fast sequence distance estimator that uses MinHash
