Analysis of mcr-1 gene (mobilized colistin resistance) for sequence variation
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fasta:file
A fasta file.
*.{fasta.gz,fasta,fa.gz,fa,fna.gz,fna}
tsv
*.tsv:file
mcroni results in TSV format
*.tsv
fa
*.fa:file
mcr-1 matching sequences
*.fa
versions
versions.yml:file
File containing software versions
versions.yml
Scripts for finding and processing promoter variants upstream of mcr-1
