A tool to create consensus sequences and variant calls from nanopore sequencing data
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
reads
List of input nanopore fasta/FastQ files
*.{fasta,fa,fastq,fastq.gz,fq,fq.gz}
assembly
Genome assembly
*.{fasta,fa}
versions
File containing software versions
versions.yml
Polished genome assembly
*.fa.gz
Neural network sequence error correction.
