A reimplemenation of Kat Comp to work with FastK databases
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fastk1_hist:file
A histogram files from the program FastK
*.hist
fastk1_ktab:file
Histogram ktab files from the program FastK (option -t)
*.ktab*
fastk2_hist:file
fastk2_ktab:file
filled
*.fi.{png,pdf}
*.fi.{png,pdf}:file
Comparison of Kmers between sample 1 and 2 in filled PNG or PDF format.
line
*.ln.{png,pdf}
*.ln.{png,pdf}:file
Comparison of Kmers between sample 1 and 2 in line PNG or PDF format.
stacked
*.st.{png,pdf}
*.st.{png,pdf}:file
Comparison of Kmers between sample 1 and 2 in stacked PNG or PDF format.
versions
versions.yml:file
File containing software versions
versions.yml
FastK based version of Merqury
