A reimplemenation of KatGC to work with FastK databases
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fastk_hist:file
A histogram files from the program FastK
*.hist
fastk_ktab:file
ktab files from the program FastK
*.ktab*
filled_gc_plot
*.fi.{png,pdf}
*.fi.{png,pdf}:file
A filled GC content plot in PNG or PDF format
line_gc_plot
*.ln.{png,pdf}
*.ln.{png,pdf}:file
stacked_gc_plot
*.st.{png,pdf}
*.st.{png,pdf}:map
A stacked GC content plot in PNG or PDF format
versions
versions.yml:file
File containing software versions
versions.yml
FastK based version of Merqury
