A reimplemenation of KatGC to work with FastK databases
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fastk_hist{:bash}
:file
A histogram files from the program FastK
*.hist
fastk_ktab{:bash}
ktab files from the program FastK
*.ktab*
filled_gc_plot{:bash}
*.fi.{png,pdf}
*.fi.{png,pdf}{:bash}
A filled GC content plot in PNG or PDF format
line_gc_plot{:bash}
*.ln.{png,pdf}{:bash}
*.ln.{png,pdf}
stacked_gc_plot{:bash}
*.st.{png,pdf}{:bash}
A stacked GC content plot in PNG or PDF format
*.st.{png,pdf}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
FastK based version of Merqury
