A reimplemenation of KatGC to work with FastK databases
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
fastk_hist:file
A histogram files from the program FastK
*.hist
fastk_ktab:file
ktab files from the program FastK
*.ktab*
filled_gc_plot_png
*.fi.png:file
A filled GC content plot in PNG format
*.fi.png
filled_gc_plot_pdf
*.fi.pdf:file
A filled GC content plot in PDF format
*.fi.pdf
line_gc_plot_png
*.ln.png:file
A line GC content plot in PNG format
*.ln.png
line_gc_plot_pdf
*.ln.pdf:file
A line GC content plot in PDF format
*.ln.pdf
stacked_gc_plot_png
*.st.png:file
A stacked GC content plot in PNG format
*.st.png
stacked_gc_plot_pdf
*.st.pdf:file
A stacked GC content plot in PDF format
*.st.pdf
versions
versions.yml:file
File containing software versions
versions.yml
FastK based version of Merqury
