Description

A genomic k-mer counter (and sequence utility) with nice features.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

meryl_dbs (directory)

Meryl k-mer database

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

hist (file)

Histogram of k-mers

*.hist
included in
genomeassembler
author
Github user mahesh-panchal
get in touch
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Tools

meryl
GPL

A genomic k-mer counter (and sequence utility) with nice features.

github.com/marbl/meryl meryl.readthedocs.io/en/latest/quick-start https://github.com/marbl/meryl