Description

A genomic k-mer counter (and sequence utility) with nice features.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

meryl_dbs (directory)

Meryl k-mer databases

kvalue (integer)

An integer value of k to use as the k-mer value.

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

meryl_db (directory)

A Meryl k-mer database that is the union sum of the input databases

*.unionsum.meryldb

Tools

meryl
GPL

A genomic k-mer counter (and sequence utility) with nice features.