Description

Provides fasta index required by miniprot alignment.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

fasta:file

Reference database in FASTA format.

Output

name:type
description
pattern

index

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.mpi:file

miniprot fasta index.

*.mpi

versions

versions.yml:file

File containing software versions

versions.yml

Tools

miniprot
MIT

A versatile pairwise aligner for genomic and protein sequences.