Description

Conversion of expandable profile to databases to the MMseqs2 databases format

Input

Name (Type)
Description
Pattern

db (directory)

Directory containing the DB to be indexed

*

Output

Name (Type)
Description
Pattern

versions (file)

File containing software versions

versions.yml

db_exprofile (directory)

Directory containing the expandable profile DB

*
included in
proteinfold
author
Github user JoseEspinosa
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Tools

mmseqs
GPL v3

MMseqs2: ultra fast and sensitive sequence search and clustering suite

github.com/soedinglab/MMseqs2 mmseqs.com/latest/userguide.pdf https://github.com/soedinglab/MMseqs2 10.1093/bioinformatics/btw006