modules/mudskipper_index

Build and store a gtf index, which is useful for converting genomic BAM/SAM files to transcriptomic BAM/SAM files.

bamtranscriptometranscriptomicindexmudskippersam

Description

Build and store a gtf index, which is useful for converting genomic BAM/SAM files to transcriptomic BAM/SAM files.

name:type

description

pattern

Transcript annotation file.

*.{gtf,gff,gff3}

name:type

description

pattern

Mudskipper index for running mudskipper conversion tools

*/

File containing software versions

versions.yml

mudskipper is a tool for converting genomic BAM/SAM files to transcriptomic BAM/RAD files.