overlay_histogram_normalized_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_OverlayHistogram_Normalized.html:file
Normalized histogram of all read lengths per sample
*NanoComp_OverlayHistogram_Normalized.html
overlay_log_histogram_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_OverlayLogHistogram.html:file
Histogram of all read lengths per sample, log function applied
*NanoComp_OverlayLogHistogram.html
overlay_log_histogram_normalized_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_OverlayLogHistogram_Normalized.html:file
Normalized histogram of all read lengths per sample, log function applied
*NanoComp_OverlayLogHistogram_Normalized.html
overlay_histogram_identity_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_OverlayHistogram_Identity.html:file
Histogram of perfect reference identity, only for bam input
*NanoComp_OverlayHistogram_Identity.html
overlay_histogram_phredscore_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_OverlayHistogram_PhredScore.html:file
Histogram of phred scores, only for bam input
*NanoComp_OverlayHistogram_PhredScore.html
percent_identity_violin_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_percentIdentity_violin.html:file
Violin plot comparing perfect reference identity, only for bam input
*NanoComp_percentIdentity_violin.html
active_pores_over_time_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_ActivePoresOverTime.html:file
Scatter plot of active pores over time, only for sequencing summary input
*NanoComp_ActivePoresOverTime.html
cumulative_yield_plot_gigabases_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_CumulativeYieldPlot_Gigabases.html:file
Scatter plot of cumulative yield, only for sequencing summary input
*NanoComp_CumulativeYieldPlot_Gigabases.html
sequencing_speed_over_time_html
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
]
*NanoComp_sequencing_speed_over_time.html:file
Scatter plot of sequencing speed over time, only for sequencing summary input
*NanoComp_sequencing_speed_over_time.html
