DNA contaminant removal using NanoLyse
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fastq:file
Basecalled reads in FASTQ.GZ format
*.fastq.gz
fasta:file
A reference fasta file against which to filter.
*.fasta
fastq
*.fastq.gz:file
Reads with contaminants removed in FASTQ format
log
*.log:file
Log of the Nanolyse run.
*.log
versions
versions.yml:file
File containing software versions
versions.yml
