Description

Visualise metagenome redundancy curve in PNG format from a single Nonpareil npo file

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

npo:file

Single npo redundancy summary file from nonpareil itself

*.npo

Output

name:type
description
pattern

png

meta:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

*.png:file

PNG file of the Nonpareil curve

*.png

versions

versions.yml:file

File containing software versions

versions.yml

Tools

nonpareil
Artistic License 2.0

Estimate average coverage and create curves for metagenomic datasets