Description

Draw previously-determined 2D layouts of the graph with diverse annotations.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

graph:file

Pangenome graph in GFA v1.0 format or ODGI binary format

*.{gfa,og}

lay:file

2D layout from ‘odgi layout’ in LAY binary format

*.{lay}

Output

name:type
description
pattern

png

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.png:file

File in PNG format containing a 2D drawing of a pangenome graph

*.{png}

versions

versions.yml:file

File containing software versions

versions.yml