Description

Draw previously-determined 2D layouts of the graph with diverse annotations.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

graph (file)

Pangenome graph in GFA v1.0 format or ODGI binary format

*.{gfa,og}

lay (file)

2D layout from ‘odgi layout’ in LAY binary format

*.{lay}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

png (file)

File in PNG format containing a 2D drawing of a pangenome graph

*.{png}