Description

Merge unitigs into a single node preserving the node order.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

graph (file)

Pangenome graph in GFA v1.0 format or in ODGI binary format

*.{gfa,og}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

unchopped_graph (file)

Unchopped pangenome graph in ODGI binary format

*.{og}