Description

Visualize a variation graph in 1D.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

graph:file

Pangenome graph in binary ODGI or in GFA v1.0 format

*.{og,gfa}

Output

name:type
description
pattern

png

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.png:file

A 1D visualization of a pangenome graph.

*.{png}

versions

versions.yml:file

File containing software versions

versions.yml