Description

Visualize a variation graph in 1D.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

graph (file)

Pangenome graph in binary ODGI or in GFA v1.0 format

*.{og,gfa}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

png (file)

A 1D visualization of a pangenome graph.

*.{png}