Description

Filters peptide/protein identification results by different criteria.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

id_file:file

Peptide-spectrum matches.

*.{idXML,consensusXML}

filter_file:file

Optional idXML file to filter on/out peptides or proteins

Output

name:type
description
pattern

filtered

meta:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

*.{idXML,consensusXML}:file

Filtered peptide-spectrum matches.

*.{idXML,consensusXML}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

openms
BSD

OpenMS is an open-source software C++ library for LC-MS data management and analyses