Description

Switches between different scores of peptide or protein hits in identification data

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'sample1', single_end:false ]

idxml (file)

Identification file containing a primary PSM score

*.{idXML}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'sample1', single_end:false ]

versions (file)

File containing software versions

versions.yml

idxml (file)

Identification file containing a new primary PSM score
obtained from a specified meta value

*.{idXML}

Tools

openms
BSD

OpenMS is an open-source software C++ library for LC-MS data management and analyses