Description

A tool for peak detection in high-resolution profile data (Orbitrap or FTICR)

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]

mzml (file)

Mass spectrometer output file in mzML format

*.{mzML}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]

versions (file)

File containing software versions

versions.yml

mzml (file)

Peak-picked mass spectrometer output file in mzML format

*.{mzML}

Tools

openms
BSD

OpenMS is an open-source software C++ library for LC-MS data management and analyses