Find and remove PCR/optical duplicates
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
input:file
pair file
pairs
*.pairs.gz:file
Duplicates removed pairs
*.{pairs.gz}
stat
*.pairs.stat:file
stats of the pairs
*.{pairs.stat}
versions
versions.yml:file
File containing software versions
versions.yml
CLI tools to process mapped Hi-C data
