Description

Flip pairs to get an upper-triangular matrix

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

sam:file

pair file

chromsizes:file

chromosome size file

Output

name:type
description
pattern

flip

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.flip.gz:file

output file of flip

*.{flip.gz}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

pairtools
MIT

CLI tools to process mapped Hi-C data