Flip pairs to get an upper-triangular matrix
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
sam
:file
pair file
chromsizes
chromosome size file
flip
*.flip.gz
output file of flip
*.{flip.gz}
versions_pairtools
${task.process}
:string
The name of the process
pairtools
The name of the tool
pairtools --version | sed 's/.*pairtools.*version //'
:eval
The expression to obtain the version of the tool
versions
CLI tools to process mapped Hi-C data
