Flip pairs to get an upper-triangular matrix
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
sam{:bash}
:file
pair file
chromsizes{:bash}
chromosome size file
flip{:bash}
*.flip.gz{:bash}
output file of flip
*.{flip.gz}
versions_pairtools{:bash}
${task.process}{:bash}
:string
The name of the process
pairtools{:bash}
The name of the tool
pairtools --version | sed 's/.*pairtools.*version //'{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
CLI tools to process mapped Hi-C data
