Description

Merge multiple pairs/pairsam files

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

allpairs:file

All pair files to merge

Output

name:type
description
pattern

pairs

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*pairs.gz:file

Merged pairs file

*.{pairs.gz}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

pairtools
MIT

CLI tools to process mapped Hi-C data

http://pairtools.readthedocs.io https://github.com/mirnylab/pairtools
Github user nservant
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