Assign restriction fragments to pairs
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
pairs:file
pairs file
frag:file
a tab-separated BED file with the positions of restriction fragments (chrom, start, end). Can be generated using cooler digest.
restrict
*.pairs.gz:file
Filtered pairs file
*.{pairs.gz}
versions
versions.yml:file
File containing software versions
versions.yml
CLI tools to process mapped Hi-C data
