Assign restriction fragments to pairs
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
pairs
pairs file
frag
a tab-separated BED file with the positions of restriction fragments (chrom, start, end). Can be generated using cooler digest.
versions
File containing software versions
versions.yml
restrict
Filtered pairs file
*.{pairs.gz}
CLI tools to process mapped Hi-C data
