Description

Select pairs according to given condition by options.args

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

input:file

pairs file

Output

name:type
description
pattern

selected

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.selected.pairs.gz:file

Selected pairs file

*.{selected.pairs.gz}

unselected

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.unselected.pairs.gz:file

Rest pairs file.

*.{unselected.pairs.gz}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

pairtools
MIT

CLI tools to process mapped Hi-C data