Description

Select pairs according to given condition by options.args

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]

input (file)

pairs file

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]

versions (file)

File containing software versions

versions.yml

selected (file)

Selected pairs file

*.{selected.pairs.gz}

unselected (file)

Rest pairs file.

*.{unselected.pairs.gz}

Tools

pairtools
MIT

CLI tools to process mapped Hi-C data