Description

Sort a .pairs/.pairsam file

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

input (file)

A pairs file

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

sorted (file)

Sorted pairs file

*.{pairs.gz}

Tools

pairtools
MIT

CLI tools to process mapped Hi-C data