Description

Sort a .pairs/.pairsam file

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

input:file

A pairs file

Output

name:type
description
pattern

sorted

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.pairs.gz:file

Sorted pairs file

*.{pairs.gz}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

pairtools
MIT

CLI tools to process mapped Hi-C data