Split a .pairsam file into .pairs and .sam.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
pairs{:bash}
:file
pairsam file
*.split.pairs.gz{:bash}
Duplicates removed pairs
*.{pairs.gz}
bam{:bash}
*.bam{:bash}
Output BAM file
*.bam
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
CLI tools to process mapped Hi-C data
