Description

Create visualizations from a tsv coverage histogram created with panacus.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]

tsv (file)

TSV coverage histogram created with panacus histgrowth

*.tsv

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]

versions (file)

File containing software versions

versions.yml

image (file)

Visualizations created from the coverage histogram

*.{eps,jpg,jpeg,pdf,pgf,png,ps,raw,rgba,svg,svgz,tif,tiff,webp}

Tools

panacus
MIT

panacus is a tool for computing counting statistics for GFA files