Description

Create visualizations from a tsv coverage histogram created with panacus.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

tsv:file

TSV coverage histogram created with panacus histgrowth

*.tsv

Output

name:type
description
pattern

image

meta:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

*.{eps,jpg,jpeg,pdf,pgf,png,ps,raw,rgba,svg,svgz,tif,tiff,webp}:file

Visualizations created from the coverage histogram

*.{eps,jpg,jpeg,pdf,pgf,png,ps,raw,rgba,svg,svgz,tif,tiff,webp}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

panacus
MIT

panacus is a tool for computing counting statistics for GFA files